PIE -- Protein Interaction information Extraction
What you can do:
An online prediction system for protein-protein interactions from text.
Highlights:
- Protein-protein interaction (PPI) extraction has been an important research topic in bio-text mining area, since the PPI information is critical for understanding biological processes.
- PIE is a configurable Web service to extract PPIs from literature, including user-provided papers as well as PubMed articles.
- After providing abstracts or papers, the prediction results are displayed in an easily readable form with essential, yet compact features.
- The PIE interface supports more features such as PDF file extraction, PubMed search tool and network communication, which are useful for biologists and bio-system developers.
- The PIE system utilizes natural language processing techniques and machine learning methodologies to predict PPI sentences, which results in high precision performance for Web users.
Keywords:
- biomedical text mining
- text mining
- literature search
- protein interaction
- protein-protein interaction
- PPI
Literature & Tutorials:
This record last updated: 07-29-2008