ADAN -- database for prediction of protein-protein interaction
What you can do:
Find information about protein-protein interaction of modular domains mediated by linear motifs.
Highlights:
- ADAN database and related web tools are online resources for the predictive analysis of ligand-domain complexes.
- ADAN database is a collection of different modular protein domains (SH2, SH3, PDZ, WW, etc.).
- It contains 3505 entries with extensive structural and functional information available, manually integrated, curated and annotated with cross-references to other databases, biochemical and thermodynamical data, simplified coordinate files, sequence files and alignments.
- Prediadan, a subset of ADAN database, offers position-specific scoring matrices for protein-protein interactions, calculated by FoldX, and predictions of optimum ligands and putative binding partners.
- Users can also scan a query sequence against selected matrices, or improve a ligand-domain interaction.
Keywords:
- protein-protein interaction
- ligand
- proteome globular domain
Literature & Tutorials:
This record last updated: 12-11-2009