PUPA SNP Finder

What you can do:
Search for single nucleotide polymorphisms (SNPs) with potential phenotypic effect.
Highlights:
  • PupaSNP takes as its input lists of genes (or generates them from chromosomal coordinates) and retrieves SNPs that could affect the conserved regions that the cellular machinery uses for the correct processing of genes (intron/exon boundaries or exonic splicing enhancers), predicted transcription factor binding sites (TFBS) and changes in amino acids in the proteins.
Keywords:
  • SNP
  • single nucleotide polymorphisms
  • SNPs
  • SNP functional analysis
  • dbSNP
  • db SNP
Literature & Tutorials:
PubMed Link: PupaSNF Finder
This record last updated: 04-21-2014

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