GTOP -- Genomes to Protein structures and functions database
What you can do:
Use sequence homology analyses to predict protein structures and functions.
Highlights:
- The GTOP database provides an extensive collection of information on protein structures and functions obtained by application of various computational tools to the amino acid sequences of entirely sequenced genomes.
- GTOP contains annotations of 3D structures, protein families, functions, and other useful data of a protein of interest in user-friendly ways to give a deep insight into the protein structure.
- The following features have been incorporated into GTOP: a platform independent structural viewer, results of HMM searches against SCOP and Pfam, secondary structure predictions, color display of exon boundaries in eukaryotic proteins, assignments of gene ontology terms, search tools, and master files.
Keywords:
- protein structure predictions
- protein fold predictions
- transmembrane helices predictions
- protein ligand binding sites
- protein function predictions
- protein homology analysis
- protein structure assignment
Literature & Tutorials:
This record last updated: 02-25-2009