Tools for comparative protein structure modeling and analysis
What you can do:
Conduct comparative protein structure modeling and analysis.
Highlights:
- MODELLER is a program for comparative modeling by satisfaction of spatial restraints;
- MODWEB is a web server for automated comparative modeling that relies on PSI-BLAST, IMPALA and MODELLER;
- MODLOOP is a web server for automated loop modeling that relies on MODELLER;
- MOULDER is a CPU intensive protocol of MODWEB for building comparative models based on distant known structures;
- MODBASE is a comprehensive database of annotated comparative models for all sequences detectably related to a known structure;
- MODVIEW is a Netscape plugin for Linux that integrates viewing of multiple sequences and structures;
- SNPWEB is a web server for structure-based prediction of the functional impact of a single amino acid substitution.
Keywords:
- protein structure modeling tool
- protein structure prediction tool
- protein structure comparison
- single amino acid substitution
- protein structural homology analysis tool
Literature & Tutorials:
This record last updated: 06-13-2005