Snap -- an integrated SNP annotation platform
What you can do:
Perform gene specific SNPs analysis for human genes.
Highlights:
- Snap is a server designed to comprehensively analyze single genes and relationships between genes basing on SNPs in the human genome.
- Using a user-friendly web interface, genes can be searched by name, description, position, SNP ID or clone name. Several public databases are integrated, including gene information from Ensembl, protein features from Uniprot/SWISS-PROT, Pfam and DAS-CBS.
- Gene relationships are fetched from BIND, MINT, KEGG and are integrated with ortholog data from TreeFam to extend the current interaction networks.
- For each gene, a gene-gene relationship network can be generated based on protein-protein interaction data, metabolic pathway connections and extended through phylogenetic relations.
- Integrated tools for primer-design and mis-splicing analysis have been developed to facilitate experimental analysis of individual genes with focus on their variation.
Keywords:
- human SNPs analysis
- human genetic polymorphisms
- human single nucleotide polymorphisms
- human SNP
- human mutations
- human genetic variations
- SNP PCR primers
- human mis-splicing
- human gene splicing
- gene splicing PCR primer design
Literature & Tutorials:
PubMed Link: Snap -- an integrated SNP annotation platform
This record last updated: 04-18-2014