The Rice PIPELINE -- A Unification Tool for Plant Functional Genomics
What you can do:
Search rice genomic and expression data by clone sequence, clone name, GenBank accession number, or keyword.
Highlights:
- The rice genomic database contains a high-quality genome sequence, a high-density genetic map with 3000 markers, 30 000 full-length cDNAs, over 700 expression profiles with a 9000 cDNA microarray and 15 000 flanking sequences with Tos17 insertions in about 3765 mutant lines from about 50 000 transposon insertion lines.
- The tool has also been developed for the dynamic collection and compilation of genomics data (genome sequences, full-length cDNAs, gene expression profiles, mutant lines, cis elements) from various databases.
Keywords:
- rice genome
- Oryza sativa genome
- rice genomic data warehouse
- plant genomes
- rice full-length cDNAs warehouse
- rice microarray data warehouse
- functional genomics
- global gene expression
- rice ESTs
- rice expressed sequence tags
- rice genetic maps
- rice genetic markers
- rice mutants
- rice transposon insertion line
Literature & Tutorials:
PubMed Link: Rice PIPELINE
This record last updated: 05-04-2005