ARAMEMNON -- A novel database for Arabidopsis integral membrane proteins
What you can do:
Search and compare predicted membrane proteins and transporters in Arabidopsis, rice, cyanobacteria, and organellar genomes.
Highlights:
- ARAMEMNON is a database about transmembrane (TM) proteins and transporters in thale cress (Arabidopsis thaliana), rice (Oryza sativa), as well as Synechocystis and organellar genomes.
- The database compiles topology and signal sequence predictions and displays the results in a directly comparable graphical output format.
- The ARAMEMNON DB enables direct comparison of the predictions of seven different TM span computation programs and the predictions of subcellular localization by eight signal peptide recognition programs.
- ARAMEMNON also contains experimental intracellular localization data from the literature, a comprehensive bibliography and many other features for data mining and sequence interpretation.
Keywords:
- Arabidopsis membrane proteins
- Arabidopsis membrane transporters
- rice membrane proteins
- rice membrane transporters
- plant membrane proteins
- plant membrane transporters
- membrane proteins
- membrane transporters
- transmembrane topology
- transmembrane proteins
- hydropathy profile
- signal peptides
- signal peptide prediction
- subcellular localization
- Synechocystis
- Thermosynechococcus
- Anabaena
- cyanobacteria membrane proteins
Literature & Tutorials:
PubMed Link: ARAMENON
This record last updated: 05-24-2005