Plant MPSS databases -- signature-based transcriptional resources for analyses of mRNA and small RNA
What you can do:
Search for gene expression data in model plants generated by MPSS (massively parallel signature sequencing) technology.
Highlights:
- This Web site contains a series of MPSS generated gene expression data for four species (Arabidopsis, rice, grape and Magnaporthe grisea, the rice blast fungus).
- The data measures the expression level of most genes under defined conditions and provide information about potentially novel transcripts (antisense transcripts, alternative splice isoforms and regulatory intergenic transcripts).
- A modified version of MPSS has been used to perform deep profiling of small RNAs from Arabidopsis.
Keywords:
- plant gene expression
- massively parallel signature sequencing
- mpss
- plant antisense transcripts
- plant alternative splice isoforms
- plant regulatory intergenic transcripts
- plant gene splicing
- plant mRNA
- rice gene expression
- Oryza sativa gene expression
- Arabidopsis gene expression
- grape gene expression
- rice blast fungus gene expression
- Magnaporthe grisea gene expression
Literature & Tutorials:
This record last updated: 02-22-2006