RNAz -- prediction of thermodynamically stable and evolutionarily conserved RNA structures
What you can do:
Detect thermodynamically stable and evolutionarily conserved RNA secondary structures in multiple sequence alignments.
Highlights:
- We present a web server that uses the RNAz algorithm to detect functional RNA structures in multiple alignments of nucleotide sequences.
- The server provides access to a complete and fully automatic analysis pipeline that allows not only to analyze single alignments in a variety of formats, but also to conduct complex screens of large genomic regions.
- Results are presented on a website that is illustrated by various structure representations and can be downloaded for local view.
Keywords:
- Conserved Sequence
- Molecular Sequence Data
- Nucleic Acid Conformation
- RNA Regulatory Sequences
- Sequence Alignment
- Sequence Analysis
- Thermodynamics
- RNA secondary structure
- RNA
- RNA structure
- multiple alignment
- nucleotide sequence
Literature & Tutorials:
This record last updated: 01-05-2021