MOODS -- MOtif Occurrence Detection Suite
What you can do:
Find information about DNA sequences.
Highlights:
- MOODS is a software package for matching position weight matrices against DNA sequences.
- MOODS implements state-of-the-art online matching algorithms, achieving considerably faster scanning speed than with a simple brute-force search.
- It is written in C++, with bindings for the popular BioPerl and Biopython toolkits.
- It can easily be adapted for different purposes and integrated into existing workflows.
- It can also be used as a C++ library.
Keywords:
- sequence analysis
- sequence motif
- position specific scoring matrix
- position weighted matrix
Literature & Tutorials:
This record last updated: 12-1-2009